Computational Notebooks for Biomedical Research – Michal Krassowski
2 December, 11am – noon, Microsoft Teams (a link to the session will be circulated a few days before the event)
To register, please click here: oxford.onlinesurveys.ac.uk/computational-notebooks-for-biomedical-research-2-dec
Demonstrate the capabilities of the computational notebooks in application to biomedical research and best practices for the use of notebooks.
This session will cover the following topics: Jupyter notebooks (Python and R), R (markdown) notebooks, reproducibility and repeatability, extensions in Jupyter ecosystem, notebooks widgets, regulatory musings.
At the end of the session, participants will be able to: – decide which format of notebooks suits their needs best, – work with the notebooks in the chosen format, – create simple notebook widgets, – manage notebooks in a git repository and share their work online (Binder)